HL_8VVU_063

3D structure

PDB id

8VVU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

ACAUGACAUCGU

Length

12 nucleotides

Bulged bases

8VVU|1|WA|A|3954

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVU|1|WA|A|3949
8VVU|1|WA|C|3950
8VVU|1|WA|A|3951
8VVU|1|WA|U|3952
8VVU|1|WA|G|3953
8VVU|1|WA|A|3954
8VVU|1|WA|C|4063
8VVU|1|WA|A|4064
8VVU|1|WA|U|4065
8VVU|1|WA|C|4066
8VVU|1|WA|G|4067
8VVU|1|WA|U|4068

Current chains

Chain WA

28S rRNA

Nearby chains

Chain HA

L36