HL_8VVU_106

3D structure

PDB id

8VVU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CUAUUUUGUUGGUUUUCGG

Length

19 nucleotides

Bulged bases

8VVU|1|ZA|U|890, 8VVU|1|ZA|G|891, 8VVU|1|ZA|U|892

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVU|1|ZA|C|884
8VVU|1|ZA|U|885
8VVU|1|ZA|A|886
8VVU|1|ZA|U|887
8VVU|1|ZA|U|888
8VVU|1|ZA|U|889
8VVU|1|ZA|U|890
8VVU|1|ZA|G|891
8VVU|1|ZA|U|892
8VVU|1|ZA|U|893
8VVU|1|ZA|G|894
8VVU|1|ZA|G|895
8VVU|1|ZA|U|896
8VVU|1|ZA|U|897
8VVU|1|ZA|U|898
8VVU|1|ZA|U|899
8VVU|1|ZA|C|900
8VVU|1|ZA|G|901
8VVU|1|ZA|G|902

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain LB

S11