HL_8VVU_120

3D structure

PDB id

8VVU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

AUUGCAAUUAUU

Length

12 nucleotides

Bulged bases

8VVU|1|ZA|U|1621, 8VVU|1|ZA|U|1622, 8VVU|1|ZA|A|1623

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVU|1|ZA|A|1614
8VVU|1|ZA|U|1615
8VVU|1|ZA|U|1616
8VVU|1|ZA|G|1617
8VVU|1|ZA|C|1618
8VVU|1|ZA|A|1619
8VVU|1|ZA|A|1620
8VVU|1|ZA|U|1621
8VVU|1|ZA|U|1622
8VVU|1|ZA|A|1623
8VVU|1|ZA|U|1624
8VVU|1|ZA|U|1625

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain DC

uS14

Chain PB

S15

Chain SB

S18

Chain TB

S19