HL_8VVV_028
3D structure
- PDB id
- 8VVV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ribosomes bound to Anisomycin in the nonrotated conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CAGUCGGCAGAGCGAGAAAGAGAGUGGCGCGGACGCUACG
- Length
- 40 nucleotides
- Bulged bases
- 8VVV|1|5|C|2100, 8VVV|1|5|C|2266, 8VVV|1|5|U|2273, 8VVV|1|5|C|2275
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VVV|1|5|C|2093
8VVV|1|5|A|2094
8VVV|1|5|G|2095
8VVV|1|5|U|2096
8VVV|1|5|C|2097
8VVV|1|5|G|2098
8VVV|1|5|G|2099
8VVV|1|5|C|2100
8VVV|1|5|A|2101
8VVV|1|5|G|2102
8VVV|1|5|A|2103
8VVV|1|5|G|2104
8VVV|1|5|C|2105
8VVV|1|5|G|2106
8VVV|1|5|A|2107
8VVV|1|5|G|2108
8VVV|1|5|A|2109
8VVV|1|5|A|2110
8VVV|1|5|A|2111
8VVV|1|5|G|2112
8VVV|1|5|A|2113
8VVV|1|5|G|2114
8VVV|1|5|A|2115
8VVV|1|5|G|2116
8VVV|1|5|U|2117
8VVV|1|5|G|2118
8VVV|1|5|G|2119
8VVV|1|5|C|2264
8VVV|1|5|G|2265
8VVV|1|5|C|2266
8VVV|1|5|G|2267
8VVV|1|5|G|2268
8VVV|1|5|A|2269
8VVV|1|5|C|2270
8VVV|1|5|G|2271
8VVV|1|5|C|2272
8VVV|1|5|U|2273
8VVV|1|5|A|2274
8VVV|1|5|C|2275
8VVV|1|5|G|2276
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain C
- uL4
- Chain E
- L6
- Chain F
- uL30
- Chain Q
- eL18
- Chain b
- eL29
- Chain e
- eL32
- Chain r
- eL28
Coloring options: