HL_8VVV_090

3D structure

PDB id

8VVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the nonrotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UAUUUUGUUGGUUUUCG

Length

17 nucleotides

Bulged bases

8VVV|1|9|U|889, 8VVV|1|9|U|890, 8VVV|1|9|U|893

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVV|1|9|U|885
8VVV|1|9|A|886
8VVV|1|9|U|887
8VVV|1|9|U|888
8VVV|1|9|U|889
8VVV|1|9|U|890
8VVV|1|9|G|891
8VVV|1|9|U|892
8VVV|1|9|U|893
8VVV|1|9|G|894
8VVV|1|9|G|895
8VVV|1|9|U|896
8VVV|1|9|U|897
8VVV|1|9|U|898
8VVV|1|9|U|899
8VVV|1|9|C|900
8VVV|1|9|G|901

Current chains

Chain 9

18S rRNA

Nearby chains

Chain GG

eS6

Chain LL

uS17