HL_8VVV_101

3D structure

PDB id

8VVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the nonrotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CCCG

Length

4 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8VVV_101 not in the Motif Atlas

Homologous match to HL_9H3G_103

Geometric discrepancy: 0.5115

The information below is about HL_9H3G_103

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33487.2

Basepair signature

cWW-cWW

Number of instances in this motif group

3

Unit IDs

8VVV|1|9|C|1416
8VVV|1|9|C|1417
8VVV|1|9|C|1423
8VVV|1|9|G|1424

Current chains

Chain 9

18S rRNA

Nearby chains

Chain QQ

uS9

Chain TT

eS19