HL_8VY1_002
3D structure
- PDB id
- 8VY1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mango II bound to 365A-088
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAAGGAGAGGAGAGGAAGAGGAGAG
- Length
- 26 nucleotides
- Bulged bases
- 8VY1|1|B|A|12, 8VY1|1|B|A|17, 8VY1|1|B|A|19
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_16725.1
- Basepair signature
- cWW-tSH-F-cHW-cWH-F-F-tSH-cWH-cHW-cWH-cHW-cWH-cWH-cHW-tSH-cHW-cWH-F-cWH-F
- Number of instances in this motif group
- 1
Unit IDs
8VY1|1|B|C|6
8VY1|1|B|G|7
8VY1|1|B|A|8
8VY1|1|B|A|9
8VY1|1|B|G|10
8VY1|1|B|G|11
8VY1|1|B|A|12
8VY1|1|B|G|13
8VY1|1|B|A|14
8VY1|1|B|G|15
8VY1|1|B|G|16
8VY1|1|B|A|17
8VY1|1|B|G|18
8VY1|1|B|A|19
8VY1|1|B|G|20
8VY1|1|B|G|21
8VY1|1|B|A|22
8VY1|1|B|A|23
8VY1|1|B|G|24
8VY1|1|B|A|25
8VY1|1|B|G|26
8VY1|1|B|G|27
8VY1|1|B|A|28
8VY1|1|B|G|29
8VY1|1|B|A|30
8VY1|1|B|G|31
Current chains
- Chain B
- Chains: A,B,C
Nearby chains
- Chain A
- Chains: A,B,C
- Chain C
- Chains: A,B,C
Coloring options: