Motif HL_16725.1 Version HL_16725.1 of this group appears in releases 4.0 to 4.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 22 | 23 | 1-23 | 2-22 | 5-8 | 5-9 | 5-18 | 6-10 | 6-19 | 7-11 | 7-21 | 9-12 | 10-13 | 11-16 | 12-17 | 12-18 | 13-19 | 16-21 | |||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_8VY1_002 | 8VY1 | 0.0000 | 3 | B | Chains: A,B,C | C | 6 | G | 7 | A | 8 | A | 9 | G | 10 | G | 11 | G | 13 | A | 14 | G | 15 | G | 16 | G | 18 | G | 20 | G | 21 | A | 22 | A | 23 | G | 24 | A | 25 | G | 26 | G | 27 | A | 28 | G | 29 | A | 30 | G | 31 | cWW | tSH | tSH | cWH | cHW | cWH | cHW | cHW | cWH | cWH | cWH | cHW | tSH | cWH | cWH | cHW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CGAAGGAGAGGAGAGGAAGAGGAGAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAAGGAGAGGAGAGGAAGAGGAGA | 1 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2025-08-13 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-tSH-F-cHW-cWH-F-F-tSH-cWH-cHW-cWH-cHW-cWH-cWH-cHW-tSH-cHW-cWH-F-cWH-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: