HL_8W2N_038
3D structure
- PDB id
- 8W2N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon and Elongation Factor P bound (uL1 in the open conformation)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CGACACAG
- Length
- 8 nucleotides
- Bulged bases
- 8W2N|1|1|A|1614, 8W2N|1|1|A|1616, 8W2N|1|1|A|1618
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8W2N_038 not in the Motif Atlas
- Geometric match to HL_9DFE_038
- Geometric discrepancy: 0.1395
- The information below is about HL_9DFE_038
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_28592.1
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
8W2N|1|1|C|1612
8W2N|1|1|G|1613
8W2N|1|1|A|1614
8W2N|1|1|C|1615
8W2N|1|1|A|1616
8W2N|1|1|C|1617
8W2N|1|1|A|1618
8W2N|1|1|G|1619
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain S
- 50S ribosomal protein L22
- Chain d
- 50S ribosomal protein L34
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