HL_8W51_029
3D structure
- PDB id
- 8W51 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of YchF(H114A) on E.coli 50S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- CGUAAUAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8W51_029 not in the Motif Atlas
- Homologous match to HL_6PRV_002
- Geometric discrepancy: 0.3961
- The information below is about HL_6PRV_002
- Detailed Annotation
- GNRA wlth tandem sheared
- Broad Annotation
- No text annotation
- Motif group
- HL_98423.3
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
8W51|1|A|C|1092
8W51|1|A|G|1093
8W51|1|A|U|1094
8W51|1|A|A|1095
8W51|1|A|A|1096
8W51|1|A|U|1097
8W51|1|A|A|1098
8W51|1|A|G|1099
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 5
- 50S ribosomal protein L36
- Chain G
- 50S ribosomal protein L6
- Chain J
- Large ribosomal subunit protein uL11
Coloring options: