HL_8WHX_051
3D structure
- PDB id
- 8WHX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo- EM structure of Mycobacterium smegmatis 70S ribosome and RafH.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GUAACUAUAAC
- Length
- 11 nucleotides
- Bulged bases
- 8WHX|1|A|A|2137
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8WHX_051 not in the Motif Atlas
- Geometric match to HL_5TBW_049
- Geometric discrepancy: 0.1315
- The information below is about HL_5TBW_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84702.1
- Basepair signature
- cWW-F-F-tHW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
8WHX|1|A|G|2134
8WHX|1|A|U|2135
8WHX|1|A|A|2136
8WHX|1|A|A|2137
8WHX|1|A|C|2138
8WHX|1|A|U|2139
8WHX|1|A|A|2140
8WHX|1|A|U|2141
8WHX|1|A|A|2142
8WHX|1|A|A|2143
8WHX|1|A|C|2144
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain w
- Ribosome hibernation promotion factor RafH
Coloring options: