HL_8WHX_064

3D structure

PDB id

8WHX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo- EM structure of Mycobacterium smegmatis 70S ribosome and RafH.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

UGGAGCAG

Length

8 nucleotides

Bulged bases

8WHX|1|A|G|2753

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8WHX_064 not in the Motif Atlas

Homologous match to HL_7RQB_061

Geometric discrepancy: 0.245

The information below is about HL_7RQB_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91104.1

Basepair signature

cWW-F

Number of instances in this motif group

12

Unit IDs

8WHX|1|A|U|2752
8WHX|1|A|G|2753
8WHX|1|A|G|2754
8WHX|1|A|A|2755
8WHX|1|A|G|2756
8WHX|1|A|C|2757
8WHX|1|A|A|2758
8WHX|1|A|G|2759

Current chains

Chain A

23S rRNA

Nearby chains

Chain I

50S ribosomal protein L6