HL_8WHY_009

3D structure

PDB id

8WHY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo- EM structure of Mycobacterium smegmatis 50S ribosomal subunit (body 1) of 70S ribosome and RafH.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UGUGAUACCGGGUAGGGGUUG

Length

21 nucleotides

Bulged bases

8WHY|1|A|U|285, 8WHY|1|A|C|290, 8WHY|1|A|G|292, 8WHY|1|A|U|301

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WHY|1|A|U|283
8WHY|1|A|G|284
8WHY|1|A|U|285
8WHY|1|A|G|286
8WHY|1|A|A|287
8WHY|1|A|U|288
8WHY|1|A|A|289
8WHY|1|A|C|290
8WHY|1|A|C|291
8WHY|1|A|G|292
8WHY|1|A|G|293
8WHY|1|A|G|294
8WHY|1|A|U|295
8WHY|1|A|A|296
8WHY|1|A|G|297
8WHY|1|A|G|298
8WHY|1|A|G|299
8WHY|1|A|G|300
8WHY|1|A|U|301
8WHY|1|A|U|302
8WHY|1|A|G|303

Current chains

Chain A

23S rRNA

Nearby chains