HL_8WV1_044

3D structure

PDB id

8WV1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.99 Å

Loop

Sequence

CG(PSU)AAC(5MU)A(PSU)AA(4OC)G

Length

13 nucleotides

Bulged bases

8WV1|1|A|A|1935, 8WV1|1|A|C|1936

QA status

Modified nucleotides: PSU, 5MU, 4OC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WV1|1|A|C|1931
8WV1|1|A|G|1932
8WV1|1|A|PSU|1933
8WV1|1|A|A|1934
8WV1|1|A|A|1935
8WV1|1|A|C|1936
8WV1|1|A|5MU|1937
8WV1|1|A|A|1938
8WV1|1|A|PSU|1939
8WV1|1|A|A|1940
8WV1|1|A|A|1941
8WV1|1|A|4OC|1942
8WV1|1|A|G|1943

Current chains

Chain A

23S rRNA

Nearby chains