HL_8WV1_046

3D structure

PDB id

8WV1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.99 Å

Loop

Sequence

CGUGAAGAUGCG

Length

12 nucleotides

Bulged bases

8WV1|1|A|A|2052, 8WV1|1|A|A|2053, 8WV1|1|A|G|2054

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WV1|1|A|C|2048
8WV1|1|A|G|2049
8WV1|1|A|U|2050
8WV1|1|A|G|2051
8WV1|1|A|A|2052
8WV1|1|A|A|2053
8WV1|1|A|G|2054
8WV1|1|A|A|2055
8WV1|1|A|U|2056
8WV1|1|A|G|2057
8WV1|1|A|C|2058
8WV1|1|A|G|2059

Current chains

Chain A

23S rRNA

Nearby chains

Chain 0

50S ribosomal protein L32

Chain D

50S ribosomal protein L3

Chain I

50S ribosomal protein L13

Chain P

50S ribosomal protein L20

Chain Q

50S ribosomal protein L21