3D structure

PDB id
8WV1 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus
Experimental method
X-RAY DIFFRACTION
Resolution
3.99 Å

Loop

Sequence
CCGAGCGUCCACAGCGGCG
Length
19 nucleotides
Bulged bases
8WV1|1|A|U|2485
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8WV1|1|A|C|2478
8WV1|1|A|C|2479
8WV1|1|A|G|2480
8WV1|1|A|A|2481
8WV1|1|A|G|2482
8WV1|1|A|C|2483
8WV1|1|A|G|2484
8WV1|1|A|U|2485
8WV1|1|A|C|2486
8WV1|1|A|C|2487
8WV1|1|A|A|2488
8WV1|1|A|C|2489
8WV1|1|A|A|2490
8WV1|1|A|G|2491
8WV1|1|A|C|2492
8WV1|1|A|G|2493
8WV1|1|A|G|2494
8WV1|1|A|C|2495
8WV1|1|A|G|2496

Current chains

Chain A
23S rRNA

Nearby chains

Chain 4
50S ribosomal protein L36
Chain G
50S ribosomal protein L6
Chain L
50S ribosomal protein L16
Chain U
50S ribosomal protein L25

Coloring options:

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