HL_8WV1_061
3D structure
- PDB id
- 8WV1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.99 Å
Loop
- Sequence
- CUGAAAGCAUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 8WV1|1|A|G|2764, 8WV1|1|A|C|2768
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8WV1_061 not in the Motif Atlas
- Homologous match to HL_4WF9_062
- Geometric discrepancy: 0.1652
- The information below is about HL_4WF9_062
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_53269.3
- Basepair signature
- cWW-tWH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 11
Unit IDs
8WV1|1|A|C|2758
8WV1|1|A|U|2759
8WV1|1|A|G|2760
8WV1|1|A|A|2761
8WV1|1|A|A|2762
8WV1|1|A|A|2763
8WV1|1|A|G|2764
8WV1|1|A|C|2765
8WV1|1|A|A|2766
8WV1|1|A|U|2767
8WV1|1|A|C|2768
8WV1|1|A|U|2769
8WV1|1|A|A|2770
8WV1|1|A|A|2771
8WV1|1|A|G|2772
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain G
- 50S ribosomal protein L6
- Chain I
- 50S ribosomal protein L13
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