HL_8WV1_120

3D structure

PDB id

8WV1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus

Experimental method

X-RAY DIFFRACTION

Resolution

3.99 Å

Loop

Sequence

GCGUCCACAGC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WV1|1|a|G|2482
8WV1|1|a|C|2483
8WV1|1|a|G|2484
8WV1|1|a|U|2485
8WV1|1|a|C|2486
8WV1|1|a|C|2487
8WV1|1|a|A|2488
8WV1|1|a|C|2489
8WV1|1|a|A|2490
8WV1|1|a|G|2491
8WV1|1|a|C|2492

Current chains

Chain a

23S rRNA

Nearby chains

Chain 9

50S ribosomal protein L36

Chain g

50S ribosomal protein L6

Chain l

50S ribosomal protein L16

Chain u

50S ribosomal protein L25