HL_8WV1_127
3D structure
- PDB id
- 8WV1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Ambient Temperature Structure of 50S Ribosomal Subunit from Thermus Thermophilus
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.99 Å
Loop
- Sequence
- GAAGACCAC
- Length
- 9 nucleotides
- Bulged bases
- 8WV1|1|a|A|2830
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8WV1_127 not in the Motif Atlas
- Homologous match to HL_9DFE_065
- Geometric discrepancy: 0.1354
- The information below is about HL_9DFE_065
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_37889.2
- Basepair signature
- cWW-cSW-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
8WV1|1|a|G|2829
8WV1|1|a|A|2830
8WV1|1|a|A|2831
8WV1|1|a|G|2832
8WV1|1|a|A|2833
8WV1|1|a|C|2834
8WV1|1|a|C|2835
8WV1|1|a|A|2836
8WV1|1|a|C|2837
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 5
- 50S ribosomal protein L32
- Chain d
- 50S ribosomal protein L3
- Chain m
- 50S ribosomal protein L17
- Chain o
- 50S ribosomal protein L19
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