HL_8XU8_096

3D structure

PDB id

8XU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

State 2c(S2c) of yeast 80S ribosome bound to compact eEF2 and 2 tRNAs during peptidyl transferation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AAGCAGAAUU

Length

10 nucleotides

Bulged bases

8XU8|1|A|G|2898

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8XU8|1|A|A|2896
8XU8|1|A|A|2897
8XU8|1|A|G|2898
8XU8|1|A|C|2899
8XU8|1|A|A|2900
8XU8|1|A|G|2901
8XU8|1|A|A|2902
8XU8|1|A|A|2903
8XU8|1|A|U|2904
8XU8|1|A|U|2905

Current chains

Chain A

25S rRNA

Nearby chains

Chain K

Large ribosomal subunit protein uL6A

Chain o

Large ribosomal subunit protein eL40A