HL_8XZ3_027

3D structure

PDB id

8XZ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mycobacterium smegmatis 50S ribosomal subunit with Erythromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UUUAGG

Length

6 nucleotides

Bulged bases

8XZ3|1|A|G|945

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8XZ3_027 not in the Motif Atlas

Homologous match to HL_8VTW_024

Geometric discrepancy: 0.1712

The information below is about HL_8VTW_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_55195.2

Basepair signature

cWW-F

Number of instances in this motif group

6

Unit IDs

8XZ3|1|A|U|941
8XZ3|1|A|U|942
8XZ3|1|A|U|943
8XZ3|1|A|A|944
8XZ3|1|A|G|945
8XZ3|1|A|G|946

Current chains

Chain A

23S rRNA

Nearby chains

Chain M

Large ribosomal subunit protein uL15