HL_8XZ3_070
3D structure
- PDB id
- 8XZ3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mycobacterium smegmatis 50S ribosomal subunit with Erythromycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CUGAAAGCAUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 8XZ3|1|A|G|2975, 8XZ3|1|A|C|2979
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8XZ3_070 not in the Motif Atlas
- Homologous match to HL_8VTW_065
- Geometric discrepancy: 0.1188
- The information below is about HL_8VTW_065
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_56677.9
- Basepair signature
- cWW-tWH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 7
Unit IDs
8XZ3|1|A|C|2969
8XZ3|1|A|U|2970
8XZ3|1|A|G|2971
8XZ3|1|A|A|2972
8XZ3|1|A|A|2973
8XZ3|1|A|A|2974
8XZ3|1|A|G|2975
8XZ3|1|A|C|2976
8XZ3|1|A|A|2977
8XZ3|1|A|U|2978
8XZ3|1|A|C|2979
8XZ3|1|A|U|2980
8XZ3|1|A|A|2981
8XZ3|1|A|A|2982
8XZ3|1|A|G|2983
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain G
- Large ribosomal subunit protein uL6
- Chain K
- Large ribosomal subunit protein uL13
- Chain f
- 50S ribosomal protein L36
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