HL_8Y0U_059
3D structure
- PDB id
- 8Y0U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- dormant ribosome with STM1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.59 Å
Loop
- Sequence
- UUCAGUGUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8Y0U_059 not in the Motif Atlas
- Homologous match to HL_5TBW_058
- Geometric discrepancy: 0.1278
- The information below is about HL_5TBW_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_34636.1
- Basepair signature
- cWW-cWW-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
8Y0U|1|C1|U|2724
8Y0U|1|C1|U|2725
8Y0U|1|C1|C|2726
8Y0U|1|C1|A|2727
8Y0U|1|C1|G|2728
8Y0U|1|C1|U|2729
8Y0U|1|C1|G|2730
8Y0U|1|C1|U|2731
8Y0U|1|C1|G|2732
Current chains
- Chain C1
- 25S rRNA
Nearby chains
- Chain LQ
- Large ribosomal subunit protein eL18A
- Chain LT
- Large ribosomal subunit protein eL21A
- Chain La
- Large ribosomal subunit protein uL15
- Chain Lo
- Large ribosomal subunit protein eL42A
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