HL_8Y37_052
3D structure
- PDB id
- 8Y37 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Staphylococcus aureus (15B196) 50S ribosome in complex with MCX-190.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.53 Å
Loop
- Sequence
- CUAAAAGGUAACG
- Length
- 13 nucleotides
- Bulged bases
- 8Y37|1|A|A|2295, 8Y37|1|A|C|2302
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8Y37_052 not in the Motif Atlas
- Homologous match to HL_4WF9_050
- Geometric discrepancy: 0.0828
- The information below is about HL_4WF9_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_02042.2
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
8Y37|1|A|C|2291
8Y37|1|A|U|2292
8Y37|1|A|A|2293
8Y37|1|A|A|2294
8Y37|1|A|A|2295
8Y37|1|A|A|2296
8Y37|1|A|G|2297
8Y37|1|A|G|2298
8Y37|1|A|U|2299
8Y37|1|A|A|2300
8Y37|1|A|A|2301
8Y37|1|A|C|2302
8Y37|1|A|G|2303
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain K
- Large ribosomal subunit protein uL16
- Chain U
- Large ribosomal subunit protein bL27
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