HL_8Y5Q_029
3D structure
- PDB id
- 8Y5Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.coli transcription translation coupling complex in TTC-B state 4 (subclass 2) containing mRNA with 27-mer spacer, NusG, NusA, fMet-tRNA(iMet), Phe-tRNA(Phe), and GDPCP
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GACGCUUAUGCGUU
- Length
- 14 nucleotides
- Bulged bases
- 8Y5Q|1|1|U|1174, 8Y5Q|1|1|A|1175
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8Y5Q|1|1|G|1168
8Y5Q|1|1|A|1169
8Y5Q|1|1|C|1170
8Y5Q|1|1|G|1171
8Y5Q|1|1|C|1172
8Y5Q|1|1|U|1173
8Y5Q|1|1|U|1174
8Y5Q|1|1|A|1175
8Y5Q|1|1|U|1176
8Y5Q|1|1|G|1177
8Y5Q|1|1|C|1178
8Y5Q|1|1|G|1179
8Y5Q|1|1|U|1180
8Y5Q|1|1|U|1181
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain l
- 50S ribosomal protein L15
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