HL_8Y5R_027

3D structure

PDB id

8Y5R (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.coli Transcription translation coupling complex in TTC-B state 5 (subclass 1) containing mRNA with 27-mer spacer, NusG, NusA, fMet-tRNA(iMet), Phe-tRNA(Phe), and fusidic acid

Experimental method

ELECTRON MICROSCOPY

Resolution

4.5 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

8Y5R|1|1|U|1066, 8Y5R|1|1|A|1070

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8Y5R|1|1|C|1064
8Y5R|1|1|U|1065
8Y5R|1|1|U|1066
8Y5R|1|1|A|1067
8Y5R|1|1|G|1068
8Y5R|1|1|A|1069
8Y5R|1|1|A|1070
8Y5R|1|1|G|1071
8Y5R|1|1|C|1072
8Y5R|1|1|A|1073
8Y5R|1|1|G|1074

Current chains

Chain 1

23S rRNA

Nearby chains

Chain 0

Elongation factor G

Chain i

50S ribosomal protein L11