HL_8Y6O_007
3D structure
- PDB id
- 8Y6O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of the human minor pre-B complex (pre-precatalytic spliceosome) U11 and tri-snRNP part
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.38 Å
Loop
- Sequence
- CGACAUCAAGAG
- Length
- 12 nucleotides
- Bulged bases
- 8Y6O|1|P|C|65, 8Y6O|1|P|A|69
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8Y6O|1|P|C|62
8Y6O|1|P|G|63
8Y6O|1|P|A|64
8Y6O|1|P|C|65
8Y6O|1|P|A|66
8Y6O|1|P|U|67
8Y6O|1|P|C|68
8Y6O|1|P|A|69
8Y6O|1|P|A|70
8Y6O|1|P|G|71
8Y6O|1|P|A|72
8Y6O|1|P|G|73
Current chains
- Chain P
- U11 snRNA
Nearby chains
- Chain A
- pre-mRNA
- Chain C
- Pre-mRNA-processing-splicing factor 8
- Chain S
- U4/U6.U5 tri-snRNP-associated protein 1
- Chain W
- U11/U12 small nuclear ribonucleoprotein 35 kDa protein
- Chain X
- U11/U12 small nuclear ribonucleoprotein 25 kDa protein
- Chain Y
- U11/U12 small nuclear ribonucleoprotein 48 kDa protein
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