HL_8YLR_069
3D structure
- PDB id
- 8YLR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State 6 (S6) of yeast 80S ribosome bound to 2 tRNAs and eEF2 and eEF3 during tranlocation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GUUAAGAUUC
- Length
- 10 nucleotides
- Bulged bases
- 8YLR|1|A|U|1606, 8YLR|1|A|U|1607
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8YLR_069 not in the Motif Atlas
- Homologous match to HL_8C3A_035
- Geometric discrepancy: 0.2084
- The information below is about HL_8C3A_035
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_35087.1
- Basepair signature
- cWW-tWH-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
8YLR|1|A|G|1599
8YLR|1|A|U|1600
8YLR|1|A|U|1601
8YLR|1|A|A|1602
8YLR|1|A|A|1603
8YLR|1|A|G|1604
8YLR|1|A|A|1605
8YLR|1|A|U|1606
8YLR|1|A|U|1607
8YLR|1|A|C|1608
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain T
- Large ribosomal subunit protein eL19A
- Chain Z
- Large ribosomal subunit protein uL23
- Chain i
- Large ribosomal subunit protein eL34A
Coloring options: