HL_8YLR_100
3D structure
- PDB id
- 8YLR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State 6 (S6) of yeast 80S ribosome bound to 2 tRNAs and eEF2 and eEF3 during tranlocation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- GGCUGAACGCCUCUAAGUC
- Length
- 19 nucleotides
- Bulged bases
- 8YLR|1|A|G|3116, 8YLR|1|A|C|3120
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8YLR|1|A|G|3108
8YLR|1|A|G|3109
8YLR|1|A|C|3110
8YLR|1|A|U|3111
8YLR|1|A|G|3112
8YLR|1|A|A|3113
8YLR|1|A|A|3114
8YLR|1|A|C|3115
8YLR|1|A|G|3116
8YLR|1|A|C|3117
8YLR|1|A|C|3118
8YLR|1|A|U|3119
8YLR|1|A|C|3120
8YLR|1|A|U|3121
8YLR|1|A|A|3122
8YLR|1|A|A|3123
8YLR|1|A|G|3124
8YLR|1|A|U|3125
8YLR|1|A|C|3126
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain K
- Large ribosomal subunit protein uL6A
- Chain Q
- Large ribosomal subunit protein uL13A
- Chain o
- Large ribosomal subunit protein eL40A
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