HL_8YUO_021

3D structure

PDB id

8YUO (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complexed with P. putida tRNAIle2 at the A-site and P-site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.25 Å

Loop

Sequence

CUUCGGG

Length

7 nucleotides

Bulged bases

8YUO|1|A|U|1030, 8YUO|1|A|C|1031

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8YUO_021 not in the Motif Atlas

Geometric match to HL_8C3A_039

Geometric discrepancy: 0.3479

The information below is about HL_8C3A_039

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

8YUO|1|A|C|1028
8YUO|1|A|U|1029
8YUO|1|A|U|1030
8YUO|1|A|C|1031
8YUO|1|A|G|1032
8YUO|1|A|G|1033
8YUO|1|A|G|1034

Current chains

Chain A

16S rRNA

Nearby chains