HL_8YUO_080
3D structure
- PDB id
- 8YUO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome complexed with P. putida tRNAIle2 at the A-site and P-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.25 Å
Loop
- Sequence
- CGCAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8YUO_080 not in the Motif Atlas
- Homologous match to HL_7A0S_047
- Geometric discrepancy: 0.3953
- The information below is about HL_7A0S_047
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.8
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 352
Unit IDs
8YUO|1|a|C|1868
8YUO|1|a|G|1869
8YUO|1|a|C|1870
8YUO|1|a|A|1871
8YUO|1|a|A|1872
8YUO|1|a|G|1873
Current chains
- Chain a
- 23S rRNA
Nearby chains
No other chains within 10ÅColoring options: