HL_8YUP_061
3D structure
- PDB id
- 8YUP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome complexed with P. putida tRNAIle2 and A4 mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.39 Å
Loop
- Sequence
- CAUCCCG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8YUP_061 not in the Motif Atlas
- Geometric match to HL_2CZJ_007
- Geometric discrepancy: 0.3511
- The information below is about HL_2CZJ_007
- Detailed Annotation
- UNCG variation
- Broad Annotation
- UNCG variation
- Motif group
- HL_23696.2
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 8
Unit IDs
8YUP|1|a|C|885
8YUP|1|a|A|886
8YUP|1|a|U|887
8YUP|1|a|C|888
8YUP|1|a|C|889
8YUP|1|a|C|890
8YUP|1|a|G|891
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain M
- 30S ribosomal protein S13
Coloring options: