HL_8YUQ_052
3D structure
- PDB id
- 8YUQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome complexed with P. putida tRNAIle2 and dA4 mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.41 Å
Loop
- Sequence
- CUUAGG
- Length
- 6 nucleotides
- Bulged bases
- 8YUQ|1|a|U|545
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8YUQ_052 not in the Motif Atlas
- Geometric match to HL_8C3A_022
- Geometric discrepancy: 0.2727
- The information below is about HL_8C3A_022
- Detailed Annotation
- Externally structured
- Broad Annotation
- Externally structured
- Motif group
- HL_96426.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 4
Unit IDs
8YUQ|1|a|C|544
8YUQ|1|a|U|545
8YUQ|1|a|U|546
8YUQ|1|a|A|547
8YUQ|1|a|G|548
8YUQ|1|a|G|549
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain i
- 50S ribosomal protein L13
- Chain q
- 50S ribosomal protein L21
Coloring options: