HL_8YUQ_094
3D structure
- PDB id
- 8YUQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome complexed with P. putida tRNAIle2 and dA4 mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.41 Å
Loop
- Sequence
- C(OMU)GUUCG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8YUQ_094 not in the Motif Atlas
- Homologous match to HL_9DFE_060
- Geometric discrepancy: 0.0965
- The information below is about HL_9DFE_060
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_30068.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
8YUQ|1|a|C|2551
8YUQ|1|a|OMU|2552
8YUQ|1|a|G|2553
8YUQ|1|a|U|2554
8YUQ|1|a|U|2555
8YUQ|1|a|C|2556
8YUQ|1|a|G|2557
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain X
- Transfer RNA; tRNA
Coloring options: