HL_8Z70_007

3D structure

PDB id

8Z70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

State 1 (S1) of yeast 80S ribosome bound to 2 tRNAs during mRNA decoding

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUUG

Length

4 nucleotides

Bulged bases

8Z70|1|2|U|277

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8Z70_007 not in the Motif Atlas

Homologous match to HL_8C3A_198

Geometric discrepancy: 0.5379

The information below is about HL_8C3A_198

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_46878.1

Basepair signature

cWW-F

Number of instances in this motif group

30

Unit IDs

8Z70|1|2|C|276
8Z70|1|2|U|277
8Z70|1|2|U|278
8Z70|1|2|G|279

Current chains

Chain 2

18S rRNA

Nearby chains

Chain Y

Large ribosomal subunit protein eL24A