HL_8Z70_111
3D structure
- PDB id
- 8Z70 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State 1 (S1) of yeast 80S ribosome bound to 2 tRNAs during mRNA decoding
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GUAUUC
- Length
- 6 nucleotides
- Bulged bases
- 8Z70|1|C|U|125
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8Z70_111 not in the Motif Atlas
- Homologous match to HL_8C3A_077
- Geometric discrepancy: 0.1901
- The information below is about HL_8C3A_077
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_45177.3
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
8Z70|1|C|G|124
8Z70|1|C|U|125
8Z70|1|C|A|126
8Z70|1|C|U|127
8Z70|1|C|U|128
8Z70|1|C|C|129
Current chains
- Chain C
- 5.8S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: