HL_8Z70_120
3D structure
- PDB id
- 8Z70 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State 1 (S1) of yeast 80S ribosome bound to 2 tRNAs during mRNA decoding
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GCCUAACACGC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8Z70_120 not in the Motif Atlas
- Homologous match to HL_5IB8_208
- Geometric discrepancy: 0.4577
- The information below is about HL_5IB8_208
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_36684.4
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
8Z70|1|s|G|31
8Z70|1|s|C|32
8Z70|1|s|C|33
8Z70|1|s|U|34
8Z70|1|s|A|35
8Z70|1|s|A|36
8Z70|1|s|C|37
8Z70|1|s|A|38
8Z70|1|s|C|39
8Z70|1|s|G|40
8Z70|1|s|C|41
Current chains
- Chain s
- tRNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain SN
- Small ribosomal subunit protein eS31
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