HL_8ZEJ_069

3D structure

PDB id

8ZEJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

UCAUCCCGA

Length

9 nucleotides

Bulged bases

8ZEJ|1|b|C|885, 8ZEJ|1|b|C|888, 8ZEJ|1|b|C|890

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZEJ|1|b|U|884
8ZEJ|1|b|C|885
8ZEJ|1|b|A|886
8ZEJ|1|b|U|887
8ZEJ|1|b|C|888
8ZEJ|1|b|C|889
8ZEJ|1|b|C|890
8ZEJ|1|b|G|891
8ZEJ|1|b|A|892

Current chains

Chain b

23S rRNA

Nearby chains

Chain M

30S ribosomal protein S13

Chain S

30S ribosomal protein S19