HL_8ZEJ_072

3D structure

PDB id

8ZEJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

GCUUAGAAGCAGCC

Length

14 nucleotides

Bulged bases

8ZEJ|1|b|U|1066, 8ZEJ|1|b|A|1067, 8ZEJ|1|b|G|1068, 8ZEJ|1|b|A|1070, 8ZEJ|1|b|G|1071, 8ZEJ|1|b|C|1072

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZEJ|1|b|G|1063
8ZEJ|1|b|C|1064
8ZEJ|1|b|U|1065
8ZEJ|1|b|U|1066
8ZEJ|1|b|A|1067
8ZEJ|1|b|G|1068
8ZEJ|1|b|A|1069
8ZEJ|1|b|A|1070
8ZEJ|1|b|G|1071
8ZEJ|1|b|C|1072
8ZEJ|1|b|A|1073
8ZEJ|1|b|G|1074
8ZEJ|1|b|C|1075
8ZEJ|1|b|C|1076

Current chains

Chain b

23S rRNA

Nearby chains