HL_8ZEJ_074

3D structure

PDB id

8ZEJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of E.coli ribosome in complex with an engineered arrest peptide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.69 Å

Loop

Sequence

CUUAUG

Length

6 nucleotides

Bulged bases

8ZEJ|1|b|U|1174

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8ZEJ_074 not in the Motif Atlas

Geometric match to HL_4V9F_025

Geometric discrepancy: 0.3627

The information below is about HL_4V9F_025

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_92935.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

5

Unit IDs

8ZEJ|1|b|C|1172
8ZEJ|1|b|U|1173
8ZEJ|1|b|U|1174
8ZEJ|1|b|A|1175
8ZEJ|1|b|U|1176
8ZEJ|1|b|G|1177

Current chains

Chain b

23S rRNA

Nearby chains