HL_8ZEJ_104
3D structure
- PDB id
- 8ZEJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.69 Å
Loop
- Sequence
- AGUUCAUAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8ZEJ_104 not in the Motif Atlas
- Geometric match to HL_9DFE_058
- Geometric discrepancy: 0.1987
- The information below is about HL_9DFE_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_52011.1
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
8ZEJ|1|b|A|2471
8ZEJ|1|b|G|2472
8ZEJ|1|b|U|2473
8ZEJ|1|b|U|2474
8ZEJ|1|b|C|2475
8ZEJ|1|b|A|2476
8ZEJ|1|b|U|2477
8ZEJ|1|b|A|2478
8ZEJ|1|b|U|2479
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain 8
- 50S ribosomal protein L36
- Chain Z
- Transfer RNA; tRNA
- Chain g
- 50S ribosomal protein L6
- Chain n
- 50S ribosomal protein L16
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