HL_8ZFI_092
3D structure
- PDB id
- 8ZFI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GGUAAGUUC
- Length
- 9 nucleotides
- Bulged bases
- 8ZFI|1|b|U|1955
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8ZFI_092 not in the Motif Atlas
- Geometric match to HL_5J7L_182
- Geometric discrepancy: 0.117
- The information below is about HL_5J7L_182
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_20167.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
8ZFI|1|b|G|1949
8ZFI|1|b|G|1950
8ZFI|1|b|U|1951
8ZFI|1|b|A|1952
8ZFI|1|b|A|1953
8ZFI|1|b|G|1954
8ZFI|1|b|U|1955
8ZFI|1|b|U|1956
8ZFI|1|b|C|1957
Current chains
- Chain b
- RNA (2903-MER)
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain l
- 50S ribosomal protein L14
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