HL_8ZFI_102
3D structure
- PDB id
- 8ZFI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factor
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGAAUGGAAG
- Length
- 10 nucleotides
- Bulged bases
- 8ZFI|1|b|A|2406
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8ZFI_102 not in the Motif Atlas
- Geometric match to HL_5J7L_192
- Geometric discrepancy: 0.138
- The information below is about HL_5J7L_192
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_53454.2
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
8ZFI|1|b|U|2404
8ZFI|1|b|G|2405
8ZFI|1|b|A|2406
8ZFI|1|b|A|2407
8ZFI|1|b|U|2408
8ZFI|1|b|G|2409
8ZFI|1|b|G|2410
8ZFI|1|b|A|2411
8ZFI|1|b|A|2412
8ZFI|1|b|G|2413
Current chains
- Chain b
- RNA (2903-MER)
Nearby chains
- Chain m
- 50S ribosomal protein L15
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