HL_8ZGR_055

3D structure

PDB id

8ZGR (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with A/A tRNA and mRNA of WNV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GAACAGAAAUC

Length

11 nucleotides

Bulged bases

8ZGR|1|LA|A|2677

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZGR|1|LA|G|2671
8ZGR|1|LA|A|2672
8ZGR|1|LA|A|2673
8ZGR|1|LA|C|2674
8ZGR|1|LA|A|2675
8ZGR|1|LA|G|2676
8ZGR|1|LA|A|2677
8ZGR|1|LA|A|2678
8ZGR|1|LA|A|2679
8ZGR|1|LA|U|2680
8ZGR|1|LA|C|2681

Current chains

Chain LA

25S rRNA (3393-MER)

Nearby chains

Chain LB

5S ribosomal RNA; 5S rRNA

Chain LM

Large ribosomal subunit protein uL5B