HL_8ZGR_070

3D structure

PDB id

8ZGR (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with A/A tRNA and mRNA of WNV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CUUG

Length

4 nucleotides

Bulged bases

8ZGR|1|LA|U|3350

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8ZGR_070 not in the Motif Atlas

Geometric match to HL_6AJK_001

Geometric discrepancy: 0.1589

The information below is about HL_6AJK_001

Detailed Annotation

Mini UNCG related

Broad Annotation

Mini UNCG related

Motif group

HL_56334.1

Basepair signature

cWW-F

Number of instances in this motif group

16

Unit IDs

8ZGR|1|LA|C|3349
8ZGR|1|LA|U|3350
8ZGR|1|LA|U|3351
8ZGR|1|LA|G|3352

Current chains

Chain LA

25S rRNA (3393-MER)

Nearby chains

Chain SV

Small ribosomal subunit protein eS8A