HL_8ZGR_079

3D structure

PDB id

8ZGR (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with A/A tRNA and mRNA of WNV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GGUAAUUCU

Length

9 nucleotides

Bulged bases

8ZGR|1|S2|U|159

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZGR|1|S2|G|153
8ZGR|1|S2|G|154
8ZGR|1|S2|U|155
8ZGR|1|S2|A|156
8ZGR|1|S2|A|157
8ZGR|1|S2|U|158
8ZGR|1|S2|U|159
8ZGR|1|S2|C|160
8ZGR|1|S2|U|161

Current chains

Chain S2

chain 2 18S rRNA (1800-MER)

Nearby chains

Chain ST

Small ribosomal subunit protein eS6A

Chain Sd

Small ribosomal subunit protein eS24A