HL_8ZGR_094

3D structure

PDB id

8ZGR (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with A/A tRNA and mRNA of WNV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

AUUUUGUUGGUUUCU

Length

15 nucleotides

Bulged bases

8ZGR|1|S2|U|836, 8ZGR|1|S2|C|842

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZGR|1|S2|A|829
8ZGR|1|S2|U|830
8ZGR|1|S2|U|831
8ZGR|1|S2|U|832
8ZGR|1|S2|U|833
8ZGR|1|S2|G|834
8ZGR|1|S2|U|835
8ZGR|1|S2|U|836
8ZGR|1|S2|G|837
8ZGR|1|S2|G|838
8ZGR|1|S2|U|839
8ZGR|1|S2|U|840
8ZGR|1|S2|U|841
8ZGR|1|S2|C|842
8ZGR|1|S2|U|843

Current chains

Chain S2

chain 2 18S rRNA (1800-MER)

Nearby chains

Chain SX

Small ribosomal subunit protein uS17A