HL_8ZGY_105
3D structure
- PDB id
- 8ZGY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome with P/E tRNA and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CAUUUG
- Length
- 6 nucleotides
- Bulged bases
- 8ZGY|1|S2|A|1360, 8ZGY|1|S2|U|1361, 8ZGY|1|S2|U|1362, 8ZGY|1|S2|U|1363
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8ZGY|1|S2|C|1359
8ZGY|1|S2|A|1360
8ZGY|1|S2|U|1361
8ZGY|1|S2|U|1362
8ZGY|1|S2|U|1363
8ZGY|1|S2|G|1364
Current chains
- Chain S2
- chain 2 18S rRNA (1799-MER)
Nearby chains
- Chain SB
- Small ribosomal subunit protein uS7
- Chain SF
- Small ribosomal subunit protein uS9A
- Chain SI
- Small ribosomal subunit protein eS19A
Coloring options: