HL_8ZH3_003
3D structure
- PDB id
- 8ZH3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome with A/P-P/E tRNA and mRNA of WNV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CGGCGAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8ZH3_003 not in the Motif Atlas
- Homologous match to HL_8CRE_003
- Geometric discrepancy: 0.0638
- The information below is about HL_8CRE_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_37369.2
- Basepair signature
- cWW-tSH-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
8ZH3|1|LA|C|90
8ZH3|1|LA|G|91
8ZH3|1|LA|G|92
8ZH3|1|LA|C|93
8ZH3|1|LA|G|94
8ZH3|1|LA|A|95
8ZH3|1|LA|G|96
Current chains
- Chain LA
- 25S rRNA (3393-MER)
Nearby chains
- Chain LN
- Large ribosomal subunit protein eL13A
- Chain LS
- Large ribosomal subunit protein eL18A
- Chain Lc
- Large ribosomal subunit protein uL15
- Chain Lq
- Large ribosomal subunit protein eL42A
- Chain Tb
- Transfer RNA; tRNA
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