HL_8ZH3_055

3D structure

PDB id

8ZH3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome with A/P-P/E tRNA and mRNA of WNV

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GAACAGAAAUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8ZH3|1|LA|G|2672
8ZH3|1|LA|A|2673
8ZH3|1|LA|A|2674
8ZH3|1|LA|C|2675
8ZH3|1|LA|A|2676
8ZH3|1|LA|G|2677
8ZH3|1|LA|A|2678
8ZH3|1|LA|A|2679
8ZH3|1|LA|A|2680
8ZH3|1|LA|U|2681
8ZH3|1|LA|C|2682

Current chains

Chain LA

25S rRNA (3393-MER)

Nearby chains

Chain LB

5S ribosomal RNA; 5S rRNA

Chain LM

Large ribosomal subunit protein uL5B

Chain Ta

Transfer RNA; tRNA